CoNIFER is listed in Science / CAD category and made available by Niklas Krumm for Windows. Unfortunately, we have not yet reviewed CoNIFER. If you would like to submit a review of this software, we encourage you to submit us something!
CoNIFER review by publisher Niklas Krumm:
What is CoNIFER software from Niklas Krumm, what is it used for and how to use it?
Easily calculate the number of sequencing reads
CoNIFER, also knows as Copy Number Inference From Exome Reads is a Python-based tool that uses exome sequencing data to find copy number variants (CNVs) and genotype the copy-number of duplicated genes. As exome capture reactions are subject to strong and systematic capture biases between sample batches, we implemented singular value decomposition (SVD) to eliminate these biases in exome data. CoNIFER offers the ability to mix exome sequence from multiple experimental runs by eliminating batch biases. Together with a short read aligner such as mrsFAST which can align reads to multiple locations, CoNIFER can robustly detect rare CNVs and estimate the copy number of duplicated genes up to ~8 copies with current exome capture kits.
Download and install CoNIFER safely and without concerns.
CoNIFER is a software product developed by Niklas Krumm and it is listed in Other category under Science / CAD. CoNIFER is a free software product and it is fully functional for an unlimited time although there may be other versions of this software product. You can run CoNIFER on all modern Windows OS operating systems. CoNIFER was last time updated on 30.07.2012 and it has 1,175 downloads on Download.hr portal. Download and install CoNIFER safely and without concerns.
Download.hr periodically updates software information of CoNIFER from the software publisher (Niklas Krumm), but some information may be
slightly out-of-date or incorrect. CoNIFER version 0.2.1 Beta for Windows was listed on Download.hr on 30.07.2012
and it is marked as Freeware.
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Is it safe to install CoNIFER?
CoNIFER was checked for possible viruses by various leading antivirus software products and it is proven to be 100% clean and safe. Although, no malware, spyware or other
malicious threats was found we strongly advise you to check product again before installing it on your PC.
Please note that laws concerning the use of CoNIFER may vary from country to country. Please be sure that you are using CoNIFER in
accordance with the law in your country.